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Folding@PUT - PSIPRED/GenThreader
www.mamboteam.com
Folding@PUT  

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PSIPRED/GenThreader PDF Print E-mail

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Contributed by Wojciech Jaskowski   
Saturday, 12 March 2005
PSIPRED/GenThreader strona
http://bioinf.cs.ucl.ac.uk/psipred/psiform.html

opis
Fold-recognition server (czyli predykcja dla sekwencji, ktore nie maja w PDB oczywistego krewenego). PSIPRED jest nazwa calego serwera jak i algorytmu znajdywania struktury drugorzedowej.  GenThreader jest alg. predykcji trzeciorzedowej. Jest tez takie cos jak mGenThreader (ale pisza, ze ciagle w fazie eksperymentalnej - co nie oznancza, ze nie mozemy z tego skorzystac), ktore wykorzystuje alg. PSIPRED. Jest wolniejsze, ale (prawdopodobnie) lepsze.

wyniki
alg. PSIPRED byl w CASPie 3 i 4 i mial tam 1 miejsce (ale to chyba dotyczy tylko alg. PSIPRED).

uwagi
Mozna sciagnac software (v.2.4) do predykcji drugorzedowej (free)
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